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MIGUEL

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Climber, evolutionist, programmer, mathematician, and designer.
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What is Evolution ?

Wed Jun 28, 2006 10:34 PM EDT
science, evolution, biology, darwin, genes, vinesci, vinopedia, evolutionary-theory, phylogenetics, alleles, history-of-evolution, orgin-of-life
By Miguel

Charles Darwin, the father of evolution, in 1854, 5 years before he published The Origin of Species.

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First off, the props. This article is based on many books and journal articles I have read over the years as an evolutionary scientist. Although I have my own beliefs and sources, it is mostly inspired and influenced by a podcast by Zachary Moore called Evolution 101, from which I have taken quotes (italicized). Therefore, if you want more details on this subject and/or want to have a second opinion on the subject, feel free to refer to his podcast and blog. Also, feel free to ask me any questions about the article, and to let me know if some things you do not understand or if things do not seem to make any sense.

Seeing as the word evolution gets thrown around a lot lately on Newsvine, I wanted to make sure that we are clear about what the definition of evolution is. A lot of readers will be surprised to learn the simplicity of the definition and might actually modify their argument when debating against or in favor. Moreover, for the interested readers, I wanted to introduce some concepts of evolutionary theory and phylogenetics, and thus, I have decided to begin this series of articles on my field of specialization, evolutionary theory, and what better subject than "What is Evolution?".

1. A Proper Definition

A lot of the arguments on Newsvine, and in the news elsewhere for that matter, come from the fact that people do not know the proper definition of evolution. Even scientists!

Evolution is both a fact and a theory. A fact is an undeniable observation, like the fact that oil is denser than water, or the chemical reaction between two substances, etc. While the word theory represents a conceptual framework that we use to make sense of observations that we made.

So what do we mean when we say that Evolution is a fact ? Here are two perfectly scientific definitions of evolution:

Definition 1.1:
Evolution is the measurable change in the heritable traits (allele frequency) of a population over successive generations. -- Wikipedia
Definition 1.2:
In fact, evolution can be defined as any change in the frequency of alleles within a gene pool from one generation to the next. -- Helena Curtis and N. Sue Bornes, Biology 5th Ed.

For the readers who do not know what an allele is. It is any one of the many viable DNA codings of a gene. The most popular explanation uses the genes for the color of our eyes. Their exists alleles that code for blue eyes, brown eyes, etc. But, in general, only two alleles interact to determine the color of our eyes. I will not go into the details of how these alleles interact (maybe later if anybody is interested), but the idea is that evolution is simply the change in the allele frequency of a population. In this sense, it is a fact since we can observe the differences in the allele frequencies of a population over the generations by studying many species, like, for example, fruit flies or pea plants.

The role of evolutionary theory is to explain these changes in allele frequencies and make sense of those mysteries of science. One such theory was popularized by Charles Darwin in 1859, and it was based on something called natural selection, which is the process in which organisms with favorable traits are more likely to reproduce. Evolutionary theory is a scientific theory at the same level as gravitational theory, atomic theory, etc, and should not be doubted by the public. What is usually debated in public arenas is the actual origin of life, but so far we have not mentioned anything about the origins of life. This brings me to my next section.

2. What is NOT Evolution ?

In order to really understand the point of this article, it is important to contrasts definitions 1.1 and 1.2 with examples of what evolution is not. Here are two more definitions, taken from what should be reliable sources, which represents epitomal example of what evolution is not:

Definition 2.1:
The gradual process by which the present diversity of plant and animal life arose from the earliest and most primitive organisms, which is believed to have been continuing for the past 3000 million years. -- Oxford Concise Science Dictionary
Definition 2.2:
The development of a species, organism, or organ from its original or primitive state to its present or specialized state; phylogeny or ontogeny -- Webster's

These definitions are wrong in many aspects. First, they allude to the history of evolution rather than the actual fact of evolution. Using these, it would even be possible to debate whether evolution is still occurring. In definition 2.1, the use of gradual process should definitively be avoided since there are no facts proving that evolution is actually a gradual process. Actually, Stephen Jay Gould dedicated a large portion of his academic work on a theory called punctuated equilibrium, which was based on evolution occurring in steps, as an explanation of the fact of evolution. Moreover, definition 2.2 uses words such as primitive and specialized which should definitively be removed from their definitions.

It is extremely important, in your future debates, to remember that although evolutionary theory assumes that life arose at some point in time, it is unnecessary to the theory to posit a mechanism for how that life came into being. Therefore, creationism should not try to ridicule evolutionary theory since the debate on the origin of life should never be associated with evolution in the first place. Evolution is a theory of Biology -- the science that studies things that are alive, not things that become alive.

References:

  • Helena Curtis and N. Sue Bornes, Biology, 5th Edition. 1989. Worth Publishers, p.974.
  • Charles Darwin (1859). On the Origin of Species. London: John Murray.
  • Eldredge, N. and S. J. Gould (1972) "Punctuated equilibria: an alternative to phyletic gradualism" In T.J.M. Schopf, ed., Models in Paleobiology. San Francisco: Freeman Cooper. pp. 82-115.
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  • Public Discussion (32)
Darkness

Great start in what will undoubtedly be a long series (still have speciation, etc).

Using these, it would even be possible to debate whether evolution is still occurring.

Isn't it theoretically possible for a species to not be evolving? If I remember correctly, the absence of natural selection is one of the conditions for Hardy-Weinberg equilibrium. Sure this almost never happens, but is it really impossible?

  • 4 votes
Reply#1 - Thu Jun 29, 2006 12:39 AM EDT
Miguel

Good point. More details of evolutionary theory is needed to explain this. But in a nutshell, Hardy-Weinberg equilibrium is attained under a very special set of assumptions: No selection, No mutation, and No migration. This does not happen in many species. In fact, I am not sure if there are any example at the species level. But, there is a now well known example at the gene level.

In 1975, Race and Sanger reported the typing results from 1279 individuals in London. They calculated the proportions of alleles for the MN blood group locus in the London population and pretty much obtained exactly what would be expected under the Hardy-Weinberg equilibrium. This proved that the conditions of Hardy-Weinberg equilibrium were met in the human population, but for a very specific locus.

Now, I am not sure if it is possible for an actual population of species to meet the Hardy-Weinberg equilibrium conditions. If anybody can think of one, please let me know.

  • 2 votes
#1.1 - Thu Jun 29, 2006 11:06 AM EDT
Reply
praetor605

Interesting article. Several points:

I am not sure why you do not consider definitions 2.1 and 2.2 to not be evolution. They do refer to the history of evolution, but that is perfectly fine since we have evidence to show its history. One of the definitive aspects about evolution is that is can be used to explain how life cam about on this planet. Perhaps I am misunderstanding you.

Actually, Stephen Jay Gould dedicated a large portion of his academic work on a theory called punctuated equilibrium, which was based on evolution occurring in steps,

Actually there really is not a conflict between gradualism and punctuated equilibrium (PE). Natural selection is always at work it is just that organisms can reach a point where it no longer fosters large scale change. PE is almost a "zoomed out" version of gradualism and was valuable to illustrate that gradualism does not occur at some constant rate. Talking about evolution in terms of gradualism is acceptable, IMHO, if one keeps this in mind.

although evolutionary theory assumes that life arose at some point in time, it is unnecessary to the theory to posit a mechanism for how that life came into being

I hope people read this and understand it. You don't want your comments taken over by debate on origins, believe me I know:)

Keep on posting great stuff to the science section!

  • 7 votes
#2 - Thu Jun 29, 2006 1:05 AM EDT
Mykola Bilokonsky

Why do you hate america (and god)? ;)

  • 7 votes
#2.1 - Thu Jun 29, 2006 1:34 AM EDT
Brad Leclerc

Heh, Mykola, I get asked from time to time why I hate god, or why I think Satan is better then god, or an assortment of other strange questions along those lines. Why does it seem people that ask those questions (in a serious manner, hopefully unlike yourself ;)) don't seem to understand the difference between disbelief and hatred?

Anyway, that was WAY off topic, even for me. So....

Great article! Keep them coming!

  • 1 vote
#2.2 - Thu Jun 29, 2006 9:13 AM EDT
Vincent Grayson

Probably because some atheists, like myself, not only contend that there is no God, but also that if there was, the Christian god is kind of a dick with all his rules and such, and not really worthy of worship or admiration.

  • 1 vote
#2.3 - Thu Jun 29, 2006 10:27 AM EDT
Miguel

praetor605:

I am not sure why you do not consider definitions 2.1 and 2.2 to not be evolution. They do refer to the history of evolution, but that is perfectly fine since we have evidence to show its history. One of the definitive aspects about evolution is that is can be used to explain how life cam about on this planet. Perhaps I am misunderstanding you.

Well, you have to take the whole article into perspective. What I was trying to do here was to provide a proper scientific definition for the fact of evolution. While both these definition seem to provide an "okay" definition of what is evolution, I think they portray more what the result of evolution is (That's what I meant by history of evolution and not fact of evolution). What I mean is that they do not provide any easy way of distinguishing evolution from other processes. It's a small nuance, but I feel like it is an important one. Especially when you want to debate questions involving evolution and know what you are talking about.

As for your comment on gradualism and PE, well I understand what you mean but the two theories are a little bit different. They probably differ more at their definition of speciation. We might want to discuss this when I defined what speciation is in a later installment. Thanks for your constructive comments. Good discussing with people who know what they are talking about. Keep the comments coming!

  • 2 votes
#2.4 - Thu Jun 29, 2006 11:17 AM EDT
praetor605

While both these definition seem to provide an "okay" definition of what is evolution, I think they portray more what the result of evolution is

I think I would agree with this distinction more if you were discussing the actual mechanics of evolution (mutation, ecology, etc) in detail. I feel that debating the history (or results) of evolution is pretty much demanded in debates about evolution. I believe that the amount of data we have on past evolution is sufficient to allow us to separate it from other processes. What I believe you are trying to do (and correct me if wrong) is to define the way evolution works via genetics to define evolution as fact (I would say "virtual" fact). This foundation could then be used to move into the results of evolution if you wished. It is an interesting approach, but I wonder if casting the 2.1 and 2.2 definitions (which I consider valid) in a negative frame will confuse the layman.

As for my thought on PE, I will save them for your next article, which I eagerly await.

  • 4 votes
#2.5 - Thu Jun 29, 2006 1:57 PM EDT
Miguel

What I believe you are trying to do (and correct me if wrong) is to define the way evolution works via genetics to define evolution as fact (I would say "virtual" fact). This foundation could then be used to move into the results of evolution if you wished.

Yes. Exactly. I am trying to scientifically define what evolution is. There is subtle distinction, which I hope (and think) you get, that I wanted to point out. What I (and other scientists in evolutionary theory) refer to when we speak of evolution is what I have defined in the first definitions. The two other definitions are not scientific definitions and should not be used when debating evolution.

Don't get me wrong. They are "okay" definitions, but you cannot scientifically describe evolutionary theory, as I intend to do, by using them. Anyways, hope I am not confusing everybody now :-) It will probably become clearer why I define it as I do in the next installments.

  • 2 votes
#2.6 - Thu Jun 29, 2006 2:52 PM EDT
yarDeleted
Micrastur

I could be wrong, but aren't there terms for the types of evolution described in 2.1 and 2.2 that would help to eliminate the semantic amibguity (e.g. evolution 2.1 is better named X)?

  • 2 votes
#2.8 - Thu Jun 29, 2006 10:23 PM EDT
Miguel

Micrastur, you could be right. Maybe you are thinking of micro-evolution and macro-evolution. In this case, what I describe would be micro-evolution. But even then, I wanted to define evolution in the most simple and scientific way possible. Definitions 1.1 and 1.2 are scientific and very simple. Definition 2.1 and 2.2 are not. I guess they could be seen as macro-evolution, but I didn't even want to do that distinction. I wanted something more general and simple. Does that make sense ?

  • 2 votes
#2.9 - Thu Jun 29, 2006 10:30 PM EDT
Micrastur

Does that make sense ?

Definately. Thanks for the great article(s).

    #2.10 - Thu Jun 29, 2006 11:04 PM EDT
    Brad Leclerc

    @ yar

    I suppose that would depend on who you mean, "fundamentalist extremists" can be any number of groups of people, with different agendas and beliefs...I can't just guess what the reasons would be for them to inject religion into science, but I can say that injecting religion into science is like blowing into an already full balloon...you can blow all you want, but you're not actually going to affect anything, except make the whole thing blow up in your face.

    • 1 vote
    #2.11 - Thu Jun 29, 2006 11:19 PM EDT
    Vincent Grayson

    I'm not sure what he means either, I was replying to what amounted to a somewhat off-topic post, nothing to do with the actual discussion of evolution.

    • 1 vote
    #2.12 - Fri Jun 30, 2006 8:46 AM EDT
    yarDeleted
    Mykola Bilokonsky

    When I have nothing to contribute to the discussion but want to leave a comment so any friends tracking me can find an interesting article, I usually say "Why do you hate America?" because generally the more intelligent the article the more it flies in the face of dominant American values. In this case, I thought it would be amusing to add (and god) because of several old threads about this that devolved (no pun intended) into petty religious bickering.

    No offense meant ;)

    • 7 votes
    #2.14 - Fri Jun 30, 2006 9:02 PM EDT
    Ansab

    the Christian god is kind of a dick

    The Christian God! He's not too nice himself, but it's easy to land paradise. From what I understand by a Christian dude trying to convert me (unsuccessfully) I could go shoot your mother in the face rub my feces on her remains while her children watch, drown your father in her blood and my urine, and send you to an orphanage. Run by nuns. Which I burn down. While streaking. But I would still go to heaven because I love Jesus. That's pretty easy to get up there then. Some of the other religions, it's like trying to go to Harvard Medical school after Kindergarten.

      #2.15 - Sat Jul 1, 2006 3:27 AM EDT
      Mykola Bilokonsky

      Haha, so this guy wasn't a catholic then? I think the Catholic model is much more interesting. I've long said that Catholicism is the greatest work of art in human history. ;)

      (Miguel sorry for the threadjack you can feel free to delete these. In all sincerity, since I didn't say it before, I liked your post and am anxiously awaiting your next one. Please feel free to tag all such science pieces with the word "vinesci", we've started our own little corner of the vine for cool science stuff. )

      • 3 votes
      #2.16 - Sat Jul 1, 2006 1:26 PM EDT
      Miguel

      Mykola:
      Not to worry. I find it funny to read some of your comments :) Ha ha. Although, that last one from Ansab was a little too graphic for me. Just to think that you can actually write down things like that make me kinda feel weird inside. So, Ansab, could you please restrain from writing stuff like that, in my articles at least, - a simple "I could have killed a mother while her children watch" would have been enough to prove your point (even though it has nothing to do with the subject of this post).

      Anyways, I will definitively use the "vinesci" tag. Thanks Mykola.

      • 2 votes
      #2.17 - Sat Jul 1, 2006 1:58 PM EDT
      Ansab

      I'm sorry Miguel. I'll control myself next time. But great article, by the way, I really enjoyed it.

      • 2 votes
      #2.18 - Sat Jul 1, 2006 2:07 PM EDT
      Miguel

      Great! Not to worry. Just felt like I should let you know :-)

      • 2 votes
      #2.19 - Sat Jul 1, 2006 2:34 PM EDT
      Reply
      Tree

      Miguel,

      This is way off topic but is it true that "Origin of Species" contains no specific reference to evolution? I have not read the book (I intend to) but I assume you have.

      Good article - keep them coming. The science section here seems to be forever in need.

      • 1 vote
      Reply#3 - Thu Jun 29, 2006 12:39 PM EDT
      Miguel

      Yeah, it's a very interesting book, especially when you think of the time he wrote it. It was very controversial. Anyways. The book does not refer to evolution per say, I mean most of the concepts we talk about these days in evolution (in this article anyways) are very modern. They came about with discovery of DNA in the 50's by Watson and Crick, and developed with our understanding of molecular biology.

      However, the book does refer to natural selection and variation in populations. He explicitly talk about mechanisms of transitions of organic beings (his words!). So he definitively had the idea that species evolved through small changes into new organisms and so on. The main thing is that he did not refer to any particular mechanism (expect the very vague concept of natural selection) because we did not know as much biology as we do now. I wonder what he would think of Biology if he was still alive now. We know so much more than in the 1800's. You should definitively read the book (You made me want to reread it now! Ha ha.).

      Another good book to read would be The Structure of Evolutionary Theory, by Stephen Jay Gould. This is definitively on my to-read list. Cheers

      • 2 votes
      #3.1 - Thu Jun 29, 2006 1:09 PM EDT
      JasperLin

      They came about with discovery of DNA in the 50's by Watson and Crick, and developed with our understanding of molecular biology. ---Miguel

      They didn't discover DNA, they solved its structure. Sorry I'm a stickler. Please forgive me.

      While I have your attention, that quote forgot Dr. R. Franklin. I know it's debatable whether she should be included on that Nobel Prize, but it's fact that her X-ray crystallography data was shown to Watson shortly before their paper that would eventually give them the Nobel was published. Most believe that Watson took one look at that data and knew the answer. At any rate, it does not matter whether she deserves the Nobel with Watson and Crick; she definately deserves to be mentioned in the same breath as Watson and Crick when concerning the structure of DNA. This is especially because of her ingenious work on DNA during that time and the fact that everyone agrees that she was a brilliant scientist. Dr. Marie Curie was not the only one!

      Okay, sorry for the threadjack... ;)

      I guess I should contribute to the discussion. I believe that debate over evolution should extend beyond the proper scientific definition of evolution. Afterall, the problem that most people have with evolution is the implication of the theory (which I suppose definition 2.? come from.) I suppose if you want to have a scientific debate, then it should be limited to the processes of evolution. If you want to convince a non-scientist that ID is not science and should not be taught in public schools, then you have to convince the layperson through simple facts that may include things in definitions 2.?. I guess it all depends on the context. I will withhold any other comment until you publish your clarification through your next article(s) in the series, of which I wait in anticipation. Thank you!

      • 3 votes
      #3.2 - Thu Jun 29, 2006 8:22 PM EDT
      Miguel

      At any rate, it does not matter whether she deserves the Nobel with Watson and Crick; she definitely deserves to be mentioned in the same breath as Watson and Crick when concerning the structure of DNA.

      Thanks for the info. You are definitively right on this one and will make sure to not exclude her in my next comments on the structure of DNA. I should actually read a little more on this, any suggestions ?

      If you want to convince a non-scientist that ID is not science and should not be taught in public schools, then you have to convince the layperson through simple facts that may include things in definitions 2.?.

      Again, you are probably right. But the idea behind this article was not necessarily to provide you with tools for your next debate, although I would hope that it did a little. It was simply to inform people on a subject that I know quite well and is not well understood these days. I guess I do hope that understand the difference between the fact of evolution, the process (or theory) of evolution, and the origin of life. Very different things which could potentially change some of today's debates.

      Working on the next installment of this series and should be ready pretty soon. However, I still have to watch the World Cup tomorrow as one of my teams is playing against Argentina! ;-)

      • 3 votes
      #3.3 - Thu Jun 29, 2006 10:43 PM EDT
      JasperLin

      On Rosalind Franklin, I've always wanted to read the book, Rosalind Franklin: The Dark Lady of DNA, which is suppose to be a good account that strikes a more neutral position on this sometimes contentious subject. There's a mini-review on the NPR website of this book. I haven't read this book though, but someone told me about it years ago and recommended it.

      • 1 vote
      #3.4 - Fri Jun 30, 2006 8:44 PM EDT
      Miguel

      Thanks a lot. Will check it out.

        #3.5 - Sat Jul 1, 2006 1:01 AM EDT
        Reply
        yarDeleted
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